Corn Diseases and Mycotoxin Contamination of Corn Grain in Southwest New York
Joshua Putman, Field Crops and Forage Specialist
Southwest New York Dairy, Livestock and Field Crops Program

Mycotoxin is a general term for a poison produced by a fungus and can be toxic when inhaled, absorbed through the skin, or consumed at very low concentration levels. Corn and small grain cereals are especially prone to mycotoxin accumulation in their seed tissue. In the past, it was believed that the fungus affected grain only during the postharvest stage, particularly when grain was stored under suboptimal conditions (hot and humid/moist). Although these factors can promote fungal growth in storage, this occurs during the growing season as well. In the field, mycotoxin outbreaks are seasonal, and will occur under favorable weather conditions for disease development. Bird and insect damage can also increase the risk for mycotoxin contamination. In addition to mycotoxin contamination of grain crops, mycotoxigenic fungi cause ear rots and stalk rots in corn. Some corn fields in SWNY are beginning to lodge due to stalk rots. Photos were sent to Dr. Gary Bergstrom, Field Crops Plant Pathologist at Cornell University, and it was confirmed that we are experiencing stalk rot damage in corn fields throughout the state. "It is believed that drought stress was a likely contributor this year," says Bergstrom. To help reduce the risk of late-season corn disease and mycotoxin accumulation, here are a few practices to consider: plant locally adapted corn hybrids, avoid corn-after-corn rotations, apply appropriate amounts of fertilizer, and plan ahead. An article written by Dr. Bergstrom, provides detailed information about mycotoxins of corn in the Northeast. Contact Josh Putman if you are experiencing lodged corn.
Upcoming Events
Quality Wool Workshop
March 21, 2026
Alfred, NY
Please join us for a day of workshops and hands-on activities for shepherds, shearers, fiber artists, and interested community members -- learn how to produce quality fleece, process wool at-home, access markets for your wool, help your local shepherds, and strengthen our regional wool supply chain! Hosted by Cornell Cooperative Extension Allegany County in collaboration with Allegany Fresh Transport, Northeast Fiber Exchange (NEFX), Southern Tier Fiber Arts Guild, and Crooked Lane Farm. The workshop will be held at the Union University Church Community Center in Alfred, NY on Saturday, March 21st from 10 AM to 4 PM.
NY Beef Producers Assoc. & Chautauqua County Beef Producers Assoc. Region 2 Annual Meeting
March 24, 2026
Ellicottville, NY
Join us for an engaging and informative round table discussion focused on practical, performance driven cattle nutrition. This panel brings together industry leaders with hands on experience in dairy and beef strategies, ration formulation, ingredient sourcing, and on farm management.
All are welcome.
Membership is these beef producer groups is not required.
NY Beef Producers Association Region 4 Annual Meeting
April 4, 2026
Alfred, NY
Open to all interested beef and dairy producers!
Presentations:
- Tube Feeding 101
- Early Calf Care Tips
- Handling Livestock Safely
Membership in the beef producer association is not required to attend. New memberships and renewals will be accepted at the meeting; drawing will be held for 1 free membership or renewal.
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