Corn Diseases and Mycotoxin Contamination of Corn Grain in Southwest New York
Joshua Putman, Field Crops and Forage Specialist
Southwest New York Dairy, Livestock and Field Crops Program

Mycotoxin is a general term for a poison produced by a fungus and can be toxic when inhaled, absorbed through the skin, or consumed at very low concentration levels. Corn and small grain cereals are especially prone to mycotoxin accumulation in their seed tissue. In the past, it was believed that the fungus affected grain only during the postharvest stage, particularly when grain was stored under suboptimal conditions (hot and humid/moist). Although these factors can promote fungal growth in storage, this occurs during the growing season as well. In the field, mycotoxin outbreaks are seasonal, and will occur under favorable weather conditions for disease development. Bird and insect damage can also increase the risk for mycotoxin contamination. In addition to mycotoxin contamination of grain crops, mycotoxigenic fungi cause ear rots and stalk rots in corn. Some corn fields in SWNY are beginning to lodge due to stalk rots. Photos were sent to Dr. Gary Bergstrom, Field Crops Plant Pathologist at Cornell University, and it was confirmed that we are experiencing stalk rot damage in corn fields throughout the state. "It is believed that drought stress was a likely contributor this year," says Bergstrom. To help reduce the risk of late-season corn disease and mycotoxin accumulation, here are a few practices to consider: plant locally adapted corn hybrids, avoid corn-after-corn rotations, apply appropriate amounts of fertilizer, and plan ahead. An article written by Dr. Bergstrom, provides detailed information about mycotoxins of corn in the Northeast. Contact Josh Putman if you are experiencing lodged corn.
Upcoming Events
Livestock Production Field Day
August 29, 2026 : Livestock Production Field Day
Chaffee, NY and East Aurora, NY,
Join us on visits to Horizon Ridge Farm in East Aurora and Troll Bridge Farm in Chaffee for an introduction to small beef and small diversified livestock enterprises. Through walking farm tours, attendees will learn about management, meat processing, setting prices, and finding local markets. Dinner will be provided. Register by contacting Amy Barkley at amb544@cornell.edu or 716-640-0844.
Poultry Processing Workshop, Naples, NY
September 17, 2026 : Poultry Processing Workshop - Naples, NY
Naples, NY
This program is one of four statewide roadshow stops across the state, offering farmers a full poultry processing experience. The class will teach skills that build confidence, reduce costs, and strengthen your farm's independence. This hands-on workshop gives farmers the chance to process a bird from start to finish, learning every step of the workflow used by small farms across the state.
Large Animal Awareness Training For First Responders
September 19, 2026
Dunkirk, NY
Join the Chautauqua County Technical Rescue Services and NYS Veterinarian, Dr. Kate Card-Allen, for a specialized training on how to safely and effectively respond to large animal incidents. Learn techniques for managing large animals during traffic accidents, rollovers, entrapments and other transportation emergencies.
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